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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015915515.1_cds_XP_016465301.1_58267
CDS Infomation

[gene=LOC107788162] [db_xref=GeneID:107788162] [protein=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic-like] [protein_id=XP_016465301.1] [location=complement(join(61..195,655..885,981..1109))] [gbkey=CDS]
Sequence

ATGGCTCAGGTTTTTACACCATTGGTGGAAAAATGTAAAAAGTACGGACGTGCAATACGT
ATTGGAACTAACCACGGGAGCCTTTCAGATCGAATTATGAGCTATTATGGGGACTCACCT
AGGGGAATGGTTGAATCAGCATTTGAGTTTGCAAGAATTTGTCGAAAGTTGGACTTCCAC
AATTTCGTCTTCTCAATGAAAGCTAGCAATCCAGTAGTTATGGTTCAGGCGTATCGCCTT
CTTGTAGCTGAGATGTATGTTCAAGGATGGGATTATCCTTTACACTTGGGAGTTACTGAA
GCTGGTGAAGGTGAGGACGGAAGGATGAAGTCTGCAATCGGTATTGGCACACTTCTTCAG
GATGGTCTGGGTGATACAATAAGGGTTTCCCTAACTGAACCTCCAGAGGAGGAGATAGAT
CCCTGTCGACGGTTGGCAAACCTTGGAAAGAGAGCAGCTGAGCTTCAACAAGGAGTGGTA
CACGATTGCTTATGA

Peptide Sequence

PEP ID

XP_016465301.1
PEP Infomation

PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic-like [Nicotiana tabacum]
Sequence

MAQVFTPLVEKCKKYGRAIRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFH
NFVFSMKASNPVVMVQAYRLLVAEMYVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQ
DGLGDTIRVSLTEPPEEEIDPCRRLANLGKRAAELQQGVVHDCL

Transcript Sequence

Gene sequence data has not been registered.